Gene: Afg2b ENSMUSG00000118663

Description

AFG2 AAA ATPase homolog B [Source:MGI Symbol;Acc:MGI:3036261]

Gene Synonyms

C130039A10Rik, Spata5l1

Location

Chromosome 2: 122,461,111-122,474,932 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 4 transcripts (splice variants), 197 orthologues, 6 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000239506.1	Afg2b-201	2347	747aa	ENSMUSP00000159384.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N9VSG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000515817.1	Afg2b-204	2780	553aa	ENSMUSP00000294180.1	Nonsense mediated decay	-	-
ENSMUST00000515815.1	Afg2b-203	2345	553aa	ENSMUSP00000294178.1	Nonsense mediated decay	-	-
ENSMUST00000239507.1	Afg2b-202	4326	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

Gene: Afg2b ENSMUSG00000118663

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Gene: Afg2b ENSMUSG00000118663

Summary

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