Gene: Bin3 ENSMUSG00000022089

Description

bridging integrator 3 [Source:MGI Symbol;Acc:MGI:1929883]

Gene Synonyms

1700015F07Rik

Location

Chromosome 14: 70,337,537-70,377,516 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 13 transcripts (splice variants), 203 orthologues, 3 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022680.10	Bin3-201	1784	253aa	ENSMUSP00000022680.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27247	Q9JI08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000537717.1	Bin3-207	3409	232aa	ENSMUSP00000316080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000537718.1	Bin3-208	1626	153aa	ENSMUSP00000316081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000537719.1	Bin3-209	4017	102aa	ENSMUSP00000316082.1	Nonsense mediated decay		-	-
ENSMUST00000537716.1	Bin3-206	3652	102aa	ENSMUSP00000316079.1	Nonsense mediated decay		-	-
ENSMUST00000537722.1	Bin3-212	1954	232aa	ENSMUSP00000316085.1	Nonsense mediated decay		-	-
ENSMUST00000537723.1	Bin3-213	1754	232aa	ENSMUSP00000316086.1	Nonsense mediated decay		-	-
ENSMUST00000537721.1	Bin3-211	1730	60aa	ENSMUSP00000316084.1	Nonsense mediated decay		-	-
ENSMUST00000537720.1	Bin3-210	1534	106aa	ENSMUSP00000316083.1	Nonsense mediated decay		-	-
ENSMUST00000228717.2	Bin3-205	413	39aa	ENSMUSP00000154413.2	Nonsense mediated decay		A0A2I3BR15	-
ENSMUST00000228049.2	Bin3-204	600	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000226385.2	Bin3-202	524	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000227841.2	Bin3-203	201	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Gene: Bin3 ENSMUSG00000022089

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Gene: Bin3 ENSMUSG00000022089

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