Description

C1q and tumor necrosis factor related protein 5 [Source:MGI Symbol;Acc:MGI:2385958]

Location
INSDC coordinates

chromosome:GRCm38:CM001002.2:44107245:44109187:1

Transcripts



This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
C1qtnf5-201ENSMUST000001148181349243 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52777D3YUN6 F8WHS3 Q4ZJN4
Q8K479
NM_001040632
NM_001190313
NM_001190319
NM_145613
NP_001035722
NP_001177242
NP_001177248
NP_663588
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
C1qtnf5-001ENSMUST000001148161256243 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52777D3YUN6 F8WHS3 Q4ZJN4
Q8K479
NM_001040631
NP_001035721
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
C1qtnf5-002ENSMUST000001148151216243 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52777D3YUN6 F8WHS3 Q4ZJN4
Q8K479
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
C1qtnf5-004ENSMUST00000114821914223 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUN6 F8WHS3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

C1qtnf5-003ENSMUST00000152956640138 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUN6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays