Description

gap junction protein, beta 1 [Source:MGI Symbol;Acc:MGI:95719]

INSDC coordinates

chromosome:GRCm38:CM001013.2:101376378:101385629:1

Transcripts

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Gjb1-002ENSMUST000001191901585283 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NP_001289425
NP_001289426
NP_001289427
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Gjb1-001ENSMUST000000521301565283 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NM_008124
NP_001289425
NP_001289426
NP_001289427
NP_032150
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Gjb1-003ENSMUST000001190801513283 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NP_001289425
NP_001289426
NP_001289427
TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website

Gene-based displays