Description

uroporphyrinogen III synthase [Source:MGI Symbol;Acc:MGI:98917]

INSDC coordinates

chromosome:GRCm38:CM001000.2:133686243:133710072:1

Transcripts



This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Uros-001ENSMUST000000332761762265 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21934E9PYC9 E9Q8N3 E9Q9B5
P51163 Q3UG55 Q9CW78
Q9JLU5
NM_009479
NP_033505
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Uros-002ENSMUST000001061451644265 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21934E9PYC9 E9Q8N3 E9Q9B5
P51163 Q3UG55 Q9CW78
Q9JLU5
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Uros-003ENSMUST000001061461483265 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21934E9PYC9 E9Q8N3 E9Q9B5
P51163 Q3UG55 Q9CW78
Q9JLU5
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [04-09-2014]
Glossary entry for APPRIS
APPRIS website
Uros-005ENSMUST000001061441045188 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYC9 E9Q8N3 E9Q9B5
Q3TPL3 Q9CW78 Q9JLU5
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Uros-006ENSMUST0000015134851230 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q8N3 Q9CW78 Q9JLU5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Uros-008ENSMUST0000015369837149 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PYC9 E9Q8N3 E9Q9B5
Q9CW78 Q9JLU5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Uros-007ENSMUST0000012475935231 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q8N3 E9Q9B5 Q9CW78
Q9JLU5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Uros-009ENSMUST00000144789598No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Uros-004ENSMUST000001357602189No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays