Description

regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:94954075:94961561:1

Transcripts

This gene has 17 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Rfx5-017ENSMUST000001370884333 bp658 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17598D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q0P5W9
Q9JL61
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-201ENSMUST000000297724189 bp658 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17598D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q0P5W9
Q9JL61
NM_017395
NP_059091
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-009ENSMUST000001072602355 bp658 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17598D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q0P5W9
Q9JL61
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-010ENSMUST000001072552350 bp658 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17598D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q0P5W9
Q9JL61
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-004ENSMUST000001072544450 bp303 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q6DI69
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-016ENSMUST000001072534367 bp303 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79 Q6DI69
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Rfx5-012ENSMUST00000147237882 bp182 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 D3YZK7
D3Z0D4 K4DI79
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rfx5-014ENSMUST00000145031565 bp105 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 D3YZK7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rfx5-015ENSMUST00000152869538 bp91 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rfx5-013ENSMUST00000132393536 bp95 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rfx5-005ENSMUST00000142311486 bp131 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK4 D3YVW1 D3YZK7
K4DI79
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Rfx5-001ENSMUST000001441324014 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDE5 -
Rfx5-006ENSMUST00000140331705 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDE5 -
Rfx5-018ENSMUST00000145472525 bp41 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDE5 -
Rfx5-007ENSMUST00000140294346 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Rfx5-002ENSMUST000001488034139 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Rfx5-008ENSMUST00000142708680 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays